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Nomenclature of Legacy pCAMBIA vectors

The four digit numbering system works as follows:

  • First digit - indicates plant selection: 0 for absence; 1 for hygromycin resistance; 2 for kanamycin; and 3 for phosphinothricin (the vectors containing the phosphinothricin resistance gene are no longer available from CAMBIA at the request of Bayer, which owns patents restricting its use in some countries).
  • Second digit - indicates bacterial selection: 1 for spectinomycin/streptomycin resistance; 2 for chloramphenicol; 3 for kanamycin; 4 for spec/strep and kanamycin.
  • Third digit - indicates polylinker used: 0 for pUC18 polylinker; 8 for pUC8 polylinker; 9 for pUC9 polylinker.
  • Fourth digit - indicates reporter gene(s) present: 0 for no reporter gene; 1 for E.coli gusA; 2 for mgfp5; 3 for gusA:mgfp5 fusion; 4 for mgfp5:gusA fusion; 5 for Staphylococcus sp. gusA (GUSPlus).
  • Fifth digit - notes some other special feature. So far this has been used only with: pCAMBIA1305.1 and plasmids derived from it, where the .1 denotes the absence of a signal peptide from the GUSPlus™ protein; and pCAMBIA1305.2 where the .2 denotes the presence of the GRP signal peptide for in planta secretion of the GUSPlus™ protein.
  • Lagging letter - X indicates that the reporter gene lacks its own start codon and the vector is for creating fusions to the reporter; Z indicates presence of a functional lacZa for blue-white screening; a/b/c indicates the reading frame for fusions with the Fuse and Use vectors.

Notes

  • Due to resource limitations, not all possible vector feature combinations have been created at CAMBIA. You may initially be disappointed to find that we don't have, for example, a pCAMBIA2205.2. The vectors were designed however, such that it should be a relatively simple matter for a researcher needing such a vector to construct it from the components in other vectors.
  • If you have created a pCAMBIA vector derivative that other researchers will find useful, please let us know .
  • Vector Manual Addendum: Important note to pCAMBIA users

Quick-pick table

(clicking on a plasmid number will navigate to the Genbank file)

pCAMBIA

Plant Selection Gene

Bacterial Selection Gene

Polylinker

Reporter Gene

T-DNA size (bp)

Reading Frame or lacZ

Vector family

Map PDF Icon

2301

nptII

kan

pUC18

gusA

5391

-

GIS

view map

2300

nptII

kan

pUC18

-

2512

-

MSV

view map

2201

nptII

cmr

pUC18

gusA

5391

-

GIS

view map

2200

nptII

cmr

pUC18

-

2512

-

MSV

view map

1405.1

hptII

kan+ spec/strep

pUC18

gus plus

5593

lacZ

GIS

view map

1391

hptII

kan

pUC9

gusA

4427

-

FUV

view map

1391Z

hptII

kan

pUC9

gusA

4984

lacZ

PCV

view map

1391Xc

hptII

kan

pUC9

gusA

-

c

FUV

view map

1391Xb

hptII

kan

pUC9

gusA

-

b

FUV

view map

1391Xa

hptII

kan

pUC9

gusA

-

a

FUV

view map

1390

hptII

kan

pUC9

-

2630

-

MSV

view map

1381

hptII

kan

pUC8

gusA

4427

-

FUV

view map

1381Z

hptII

kan

pUC8

gusA

4984

lacZ

PCV

view map

1381Xc

hptII

kan

pUC8

gusA

-

c

FUV

view map

1381Xb

hptII

kan

pUC8

gusA

-

b

FUV

1381Xa

hptII

kan

pUC8

gusA

-

a

FUV

view map

1380

hptII

kan

pUC8

-

2630

-

MSV

view map

1304

hptII

kan

pUC18

gfp:gusA

6128

-

GFP

view map

1303

hptII

kan

pUC18

gusA:gfp

6128

-

GFP

view map

1302

hptII

kan

pUC18

gfp

4316

-

GFP

view map

1301

hptII

kan

pUC18

gusA

5607

-

GIS

view map

1300

hptII

kan

pUC18

-

2728

-

MSV

view map

1291Z

hptII

cmr

pUC9

gusA

4984

lacZ

PCV

view map

1281Z

hptII

cmr

pUC8

gusA

4984

lacZ

PCV

view map

1201

hptII

cmr

pUC18

gusA

5606

-

GIS

view map

1200

hptII

cmr

pUC18

-

2727

-

MSV

view map

0390

-

kan

pUC9

-

582

-

DIY

view map

0380

-

kan

pUC8

-

582

-

DIY

view map

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